rs8245080 SNP Detail

Summary

• ID
  rs8245080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170794929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCAGGGTT GGAGCAAATC
  GTTAGCTTGC TGTGGGTATA CCATTGAGGA AACCCTGGAC CGGATGATAG GAGGGAACTA
  CGTAAAACGA CAGCAATAGC AGTTGCTAAT AGCACCTGGT AGTTCTTCTA GAAGGGAAAC
  CTACTTTTTG CCAGGAGCCT TGTAAAATCA ATGATCTGCT CGGCAAAGTT TTAACAAGCC
  R
  TGCCCTGTTT CGGATACTAC AAATATGAAG ATGGACGAGA CACAGCTTTT CACGTCGAGT
  GCTCACAAGG TGATGGAAGA AAAAAAAAAA GAAAGTCAAG GACCTGCTGG AACTGCAAGG
  GGGAGAGGTG AGTGCTCCCC AGAACCTTCT GGGGAGAGGT CTCCGCACCT TCAGCTGAGC
  AGATGAGAAT CCTGAGCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	AKR/J	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12740146	Fcgr2b_1_JC4890_4	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	G	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	AKR/J	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8245080					SNP	A	A	A	A	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170794929 () rs orientation: forward

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	472 bp proximal
Rr372438	regulatory region 372438	within coordinates
Tssr14956	transcription start site region 14956	1549 bp upstream
Tssr14957	transcription start site region 14957	837 bp upstream
Tssr14958	transcription start site region 14958	844 bp downstream