rs8245921 SNP Detail

Summary

• ID
  rs8245921
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170795641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACCAGCC CACCCCATTT
  CCTGCAAACT TTGCAGTAAG CAGATCCACC CCACTCCACC CCCAACTTCT TGGTATCCCA
  TCTCCTCCCA GGGCCAGCCT TTACTAACCA GAAATCACTC CCAGATCTAC AGGGTCGCTG
  AGGCGGGTCT GCTCCATTTG ACACCGATAT TCTCCACTGT CATTGACTGT GGCCTTAAAC
  R
  TGTAGCTGGC TTGGACCTGG CTCCGGATGG ACCTCCCATT GTGGAACCAC TGGGTAGAAG
  AGTTCCCAGG GTTGTGGGTC CCTTCGCATG TCAGTGTCAC CGTGTCTTCC TTGAGCACCT
  GGATCCACGG GGGCTCGAGT TTGACCACAG CCTTTGGAAG ATCTGCTCAA TTTTGGAGAG
  AGCAGGCAGT GTGAGGCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	CAST/EiJ	MRL/MpJ
ss12741067	Fcgr2b_2_JC4907_3	ROCHEBIO	RPAMM	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	CAST/EiJ	MRL/MpJ
rs8245921					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170795641 () rs orientation: forward

Symbol	Name	Function Class
D1Dcr16	DNA Segment, Chr 1, Derry C. Roopenian 16	1791 bp proximal
D1Mit148	DNA segment, Chr 1, Massachusetts Institute of Technology 148	1811 bp proximal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	within coordinates
Rr372438	regulatory region 372438	within coordinates
Tssr14957	transcription start site region 14957	1549 bp upstream
Tssr14958	transcription start site region 14958	132 bp downstream