rs8245928 SNP Detail

Summary

• ID
  rs8245928
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170796332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

      AGGAGG GGGCAAAGGA GACACCCCAG NAATATCTCT CACCAAGATA TATTTCCATT
  TCTCTTCTCC ATCCCTCCTG TCACTCCCCC CTACCCCANC CCCNNAGTTG CAGATGGNTC
  TCTAATCAGA AGAACAGGGC ATGGAGCTCt gtgctggcta gtatcataaa cttgacatac
  aaattagagt tatctgaaag gagggagcct caattgggaa aaggcctTtg tgatgatttg
  aatgaaaatn gccccttata gggagtgnca ctattaagag gtgtggcctt gttggagtag
  R
  tgtggccttt tggaggaagt gggtngntgg gttggctttg aggtttcaga tgctcaagcc
  aggcccagtg ccactctctc ttcctgcAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741074	Fcgr2b_2_JC4908_7	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8245928					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170796332 () rs orientation: forward

Symbol	Name	Function Class
D1Dcr16	DNA Segment, Chr 1, Derry C. Roopenian 16	1100 bp proximal
D1Mit148	DNA segment, Chr 1, Massachusetts Institute of Technology 148	1120 bp proximal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	332 bp distal
Rr25626	regulatory region 25626	1771 bp proximal
Rr372438	regulatory region 372438	within coordinates
Tssr14958	transcription start site region 14958	538 bp upstream