rs8246087 SNP Detail

Summary

• ID
  rs8246087
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142217099 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ATGTT CCTATCATTT TATATCTGCA
  R
  TAATGTTCCT GCTGACTCTC TTCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	CAST/EiJ	DBA/2J	SPRET/EiJ
ss12741253	U71085_JC2152_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	CAST/EiJ	DBA/2J	SPRET/EiJ
rs8246087					SNP	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142217099 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19968	CpG island 19968	1927 bp distal
Cpgi19969	CpG island 19969	485 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Igf2os	insulin-like growth factor 2, opposite strand	within coordinates
Rr316	regulatory region 316	882 bp proximal
Rr658255	regulatory region 658255	1713 bp distal
Rr658256	regulatory region 658256	within coordinates
Tssr70256	transcription start site region 70256	1767 bp upstream
Tssr75899	transcription start site region 75899	1505 bp upstream
Tssr75900	transcription start site region 75900	1482 bp upstream
Tssr75901	transcription start site region 75901	1301 bp downstream
Tssr75902	transcription start site region 75902	1332 bp downstream
Tssr75903	transcription start site region 75903	1423 bp downstream