rs8246091 SNP Detail

Summary

• ID
  rs8246091
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142210428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAAGTAT AGACTTTCCT
  GGGCACCTCA GAGCTTGCCA TCCATGGTCA GGGACCCTAG AGGGTCCCTT TATGGCCCAT
  AGAATCATCT TTCTGATAAG AGCTAAATTT ACCCAGGGCA GCAGTTTGGG TCCTTGGGAG
  GCTAAACACC CCATTTTGGA GGGACACACC CCCTCCACAG GCTATGTGGC TACAGGCGGG
  S
  ACAATGGTTA GCTAGCTTTT TTAGTGGTGG GAGGCCACGA TGACCCACAG TAAGCCACCC
  TTGACCCTTC AGTTAAGTAG AGCCCTCCAG GCCGCAGCCT CAATCTCTGC TCCATAGGCC
  CAGGGGATTT CTTGCTGCAA AGAAACATGT GAGAGACCAG TGCGGAATAA TCAAGAAACA
  AATTTGTTCG AGCTCCCTTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741257	U71085_JC2159_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	C	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246091					SNP	G	G	G	G	G	C	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142210428 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19967	CpG island 19967	1579 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	1695 bp upstream
Rr658247	regulatory region 658247	within coordinates
Rr658248	regulatory region 658248	795 bp proximal
Tssr70241	transcription start site region 70241	1841 bp upstream
Tssr70242	transcription start site region 70242	1905 bp upstream
Tssr75881	transcription start site region 75881	979 bp upstream
Tssr75882	transcription start site region 75882	869 bp upstream
Tssr75883	transcription start site region 75883	633 bp upstream
Tssr75884	transcription start site region 75884	593 bp upstream
Tssr75885	transcription start site region 75885	524 bp upstream
Tssr75886	transcription start site region 75886	501 bp upstream
Tssr75887	transcription start site region 75887	781 bp downstream