rs8246093 SNP Detail

Summary

• ID
  rs8246093
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142210538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCAGGGCA GCAGTTTGGG
  TCCTTGGGAG GCTAAACACC CCATTTTGGA GGGACACACC CCCTCCACAG GCTATGTGGC
  TACAGGCGGG GACAATGGTT AGCTAGCTTT TTTAGTGGTG GGAGGCCACG ATGACCCACA
  GTAAGCCACC CTTGACCCTT CAGTTAAGTA GAGCCCTCCA GGCCGCAGCC TCAATCTCTG
  Y
  TCCATAGGCC CAGGGGATTT CTTGCTGCAA AGAAACATGT GAGAGACCAG TGCGGAATAA
  TCAAGAAACA AATTTGTTCG AGCTCCCTTG GGTAACTAAA AGTCATCTTT GCCCACTTCA
  TCAAGACCCA GACCGATCCT CCCAATACCC TCTGTGCCAC CAACCACTTG CGATCAGCAG
  GCTATAGCTA CAGCAGTTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741259	U71085_JC2159_3	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246093					SNP	C	C	C	C	C	C	T	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142210538 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19967	CpG island 19967	1469 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	1805 bp upstream
Tssr70241	transcription start site region 70241	1731 bp upstream
Tssr70242	transcription start site region 70242	1795 bp upstream
Tssr75881	transcription start site region 75881	1089 bp upstream
Tssr75882	transcription start site region 75882	979 bp upstream
Tssr75883	transcription start site region 75883	743 bp upstream
Tssr75884	transcription start site region 75884	703 bp upstream
Tssr75885	transcription start site region 75885	634 bp upstream
Tssr75886	transcription start site region 75886	611 bp upstream
Tssr75887	transcription start site region 75887	671 bp downstream
Tssr75888	transcription start site region 75888	1956 bp downstream