rs8246095 SNP Detail

Summary

• ID
  rs8246095
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142210054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                       TTGAGC ATGTGCATCC AAAGGGACCA
  K
  TCCCAACCTA CCCGCCCCCC AGCTGGCCAC CCCTCCCTAA GCAGCAGAGC CAGCCCCACC
  CATCCACCCC ACCTCCCAGG CCATGGTGAG CAGGGCCCAT GTCAGAATCC AATGGTTAGC
  GCAATGGGAT AGCCAGCACT CCTGTGAGCC TTGCTCTCCA GGGTCACCCA GTCCTCCAAG
  TATAGACTTT CCTGGGCACN TCAGAGCTTG CCATCCATGG TCAGGGACCC TAGAGGGTCC
  CTTTATGGCC CATAGAATCA TCTTTCTGAT AAGAGCTAAA TTNACCCAGG GNAGCAGTTT
  NGGTCCTTGG GAGGCTAAAC ACCCCATTTT GGAGGGACAC ACCCCAA              
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZW/Lac	SPRET/EiJ
ss12741261	U71085_JC2160_1	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZW/Lac	SPRET/EiJ
rs8246095					SNP	T	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142210054 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	1867 bp distal
Cpgi19967	CpG island 19967	1953 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	1321 bp upstream
Tssr70240	transcription start site region 70240	1964 bp downstream
Tssr75878	transcription start site region 75878	1982 bp upstream
Tssr75879	transcription start site region 75879	1941 bp upstream
Tssr75880	transcription start site region 75880	1910 bp upstream
Tssr75881	transcription start site region 75881	605 bp upstream
Tssr75882	transcription start site region 75882	495 bp upstream
Tssr75883	transcription start site region 75883	259 bp upstream
Tssr75884	transcription start site region 75884	219 bp upstream
Tssr75885	transcription start site region 75885	150 bp upstream
Tssr75886	transcription start site region 75886	127 bp upstream
Tssr75887	transcription start site region 75887	1155 bp downstream