rs8246101 SNP Detail

Summary

• ID
  rs8246101
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142209627 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GGTGT CTTTGGTGGG GCCTGGGTGG
  R
  GGTGAGCCAT TCTCCTGGGA TTAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741267	U71085_JC2161_3	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246101					SNP	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142209627 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	1440 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	894 bp upstream
Rr167001	regulatory region 167001	within coordinates
Tssr70239	transcription start site region 70239	1885 bp downstream
Tssr70240	transcription start site region 70240	1537 bp downstream
Tssr75874	transcription start site region 75874	1981 bp upstream
Tssr75875	transcription start site region 75875	1944 bp upstream
Tssr75876	transcription start site region 75876	1896 bp upstream
Tssr75877	transcription start site region 75877	1837 bp upstream
Tssr75878	transcription start site region 75878	1555 bp upstream
Tssr75879	transcription start site region 75879	1514 bp upstream
Tssr75880	transcription start site region 75880	1483 bp upstream
Tssr75881	transcription start site region 75881	178 bp upstream
Tssr75882	transcription start site region 75882	68 bp upstream
Tssr75883	transcription start site region 75883	146 bp downstream
Tssr75884	transcription start site region 75884	184 bp downstream
Tssr75885	transcription start site region 75885	231 bp downstream
Tssr75886	transcription start site region 75886	289 bp downstream
Tssr75887	transcription start site region 75887	1582 bp downstream