rs8246103 SNP Detail

Summary

• ID
  rs8246103
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142209440 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCGGA GAGACTCTGT GCGGAGGGGA
  K
  CTTGTTGACA CGCTTCAGTT TGTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741269	U71085_JC2161_5	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246103					SNP	G	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142209440 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	1253 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	707 bp upstream
Rr167001	regulatory region 167001	within coordinates
Tssr2463	transcription start site region 2463	1850 bp upstream
Tssr70235	transcription start site region 70235	1981 bp downstream
Tssr70236	transcription start site region 70236	1959 bp downstream
Tssr70237	transcription start site region 70237	1858 bp downstream
Tssr70238	transcription start site region 70238	1828 bp downstream
Tssr70239	transcription start site region 70239	1698 bp downstream
Tssr70240	transcription start site region 70240	1350 bp downstream
Tssr75874	transcription start site region 75874	1794 bp upstream
Tssr75875	transcription start site region 75875	1757 bp upstream
Tssr75876	transcription start site region 75876	1709 bp upstream
Tssr75877	transcription start site region 75877	1650 bp upstream
Tssr75878	transcription start site region 75878	1368 bp upstream
Tssr75879	transcription start site region 75879	1327 bp upstream
Tssr75880	transcription start site region 75880	1296 bp upstream
Tssr75881	transcription start site region 75881	within coordinates
Tssr75882	transcription start site region 75882	22 bp downstream
Tssr75883	transcription start site region 75883	333 bp downstream
Tssr75884	transcription start site region 75884	371 bp downstream
Tssr75885	transcription start site region 75885	418 bp downstream
Tssr75886	transcription start site region 75886	476 bp downstream
Tssr75887	transcription start site region 75887	1769 bp downstream