rs8246106 SNP Detail

Summary

• ID
  rs8246106
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142209338 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GGGGA AGCAAGCCTC CCTGGATGGG
  R
  TGACAATTAG TACACTGGTC TGGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741272	U71085_JC2162_3	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246106					SNP	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142209338 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	1151 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	605 bp upstream
Rr167001	regulatory region 167001	within coordinates
Tssr2463	transcription start site region 2463	1748 bp upstream
Tssr70232	transcription start site region 70232	1983 bp downstream
Tssr70233	transcription start site region 70233	1940 bp downstream
Tssr70234	transcription start site region 70234	1902 bp downstream
Tssr70235	transcription start site region 70235	1879 bp downstream
Tssr70236	transcription start site region 70236	1857 bp downstream
Tssr70237	transcription start site region 70237	1756 bp downstream
Tssr70238	transcription start site region 70238	1726 bp downstream
Tssr70239	transcription start site region 70239	1596 bp downstream
Tssr70240	transcription start site region 70240	1248 bp downstream
Tssr75872	transcription start site region 75872	1914 bp upstream
Tssr75873	transcription start site region 75873	1902 bp upstream
Tssr75874	transcription start site region 75874	1692 bp upstream
Tssr75875	transcription start site region 75875	1655 bp upstream
Tssr75876	transcription start site region 75876	1607 bp upstream
Tssr75877	transcription start site region 75877	1548 bp upstream
Tssr75878	transcription start site region 75878	1266 bp upstream
Tssr75879	transcription start site region 75879	1225 bp upstream
Tssr75880	transcription start site region 75880	1194 bp upstream
Tssr75881	transcription start site region 75881	83 bp downstream
Tssr75882	transcription start site region 75882	124 bp downstream
Tssr75883	transcription start site region 75883	435 bp downstream
Tssr75884	transcription start site region 75884	473 bp downstream
Tssr75885	transcription start site region 75885	520 bp downstream
Tssr75886	transcription start site region 75886	578 bp downstream
Tssr75887	transcription start site region 75887	1871 bp downstream