rs8246113 SNP Detail

Summary

• ID
  rs8246113
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142207898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGCAGGCA GGCCTCTGCG
  CAGGCGTCCC GCGGACTGTC TCCAGGTGTC ATATTGGAAG AACTTGCCCA CGGGGTATCT
  GGGGAAGTCG TCCTGGAGAG GAGGTGCTAG TCAGCAGGTT TCAGGGTATC ATGTTAGCCT
  GAGCTCCCAT CTAGGTGTCG CATATCCCCA GCCCCACTAG AGTCACCCCA CCTCAGGGCA
  R
  CTTCCCTGAA ATATCTATGT TAATGAGCAG AGGCTGACAG TAAAATGTGT GAGGGGGGCT
  TCGTGGTACC CCAAATCAAG AAGTGAGTGG TCTCTTTGTC TCACCCCATA ATTCCTTCAA
  CCCCACCTCG CTACCTACCG GAAGTACGGC CTGAGAGGTA GACACGTCCC TCTCGGACTT
  GGCGGGGGTG GCACAGTATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12741279	U71085_JC2163_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8246113					SNP	A	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142207898 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	124 bp proximal
D7Mit46	DNA segment, Chr 7, Massachusetts Institute of Technology 46	1066 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	763 bp downstream
Rr167001	regulatory region 167001	within coordinates
Tssr2462	transcription start site region 2462	1104 bp downstream
Tssr2463	transcription start site region 2463	308 bp upstream
Tssr70229	transcription start site region 70229	1144 bp downstream
Tssr70230	transcription start site region 70230	1051 bp downstream
Tssr70231	transcription start site region 70231	596 bp downstream
Tssr70232	transcription start site region 70232	543 bp downstream
Tssr70233	transcription start site region 70233	500 bp downstream
Tssr70234	transcription start site region 70234	462 bp downstream
Tssr70235	transcription start site region 70235	439 bp downstream
Tssr70236	transcription start site region 70236	417 bp downstream
Tssr70237	transcription start site region 70237	316 bp downstream
Tssr70238	transcription start site region 70238	286 bp downstream
Tssr70239	transcription start site region 70239	156 bp downstream
Tssr70240	transcription start site region 70240	152 bp upstream
Tssr75855	transcription start site region 75855	1935 bp upstream
Tssr75856	transcription start site region 75856	1896 bp upstream
Tssr75857	transcription start site region 75857	1881 bp upstream
Tssr75858	transcription start site region 75858	1843 bp upstream
Tssr75859	transcription start site region 75859	1787 bp upstream
Tssr75860	transcription start site region 75860	1732 bp upstream
Tssr75861	transcription start site region 75861	1700 bp upstream
Tssr75862	transcription start site region 75862	1153 bp upstream
Tssr75863	transcription start site region 75863	1122 bp upstream
Tssr75864	transcription start site region 75864	1093 bp upstream
Tssr75865	transcription start site region 75865	1060 bp upstream
Tssr75866	transcription start site region 75866	1013 bp upstream
Tssr75867	transcription start site region 75867	980 bp upstream
Tssr75868	transcription start site region 75868	961 bp upstream
Tssr75869	transcription start site region 75869	939 bp upstream
Tssr75870	transcription start site region 75870	926 bp upstream
Tssr75871	transcription start site region 75871	882 bp upstream
Tssr75872	transcription start site region 75872	474 bp upstream
Tssr75873	transcription start site region 75873	462 bp upstream
Tssr75874	transcription start site region 75874	252 bp upstream
Tssr75875	transcription start site region 75875	215 bp upstream
Tssr75876	transcription start site region 75876	167 bp upstream
Tssr75877	transcription start site region 75877	108 bp upstream
Tssr75878	transcription start site region 75878	157 bp downstream
Tssr75879	transcription start site region 75879	179 bp downstream
Tssr75880	transcription start site region 75880	229 bp downstream
Tssr75881	transcription start site region 75881	1523 bp downstream
Tssr75882	transcription start site region 75882	1564 bp downstream
Tssr75883	transcription start site region 75883	1875 bp downstream
Tssr75884	transcription start site region 75884	1913 bp downstream
Tssr75885	transcription start site region 75885	1960 bp downstream