rs8246114 SNP Detail

Summary

• ID
  rs8246114
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142207985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGTCCTGGA GAGGAGGTGC
  TAGTCAGCAG GTTTCAGGGT ATCATGTTAG CCTGAGCTCC CATCTAGGTG TCGCATATCC
  CCAGCCCCAC TAGAGTCACC CCACCTCAGG GCAACTTCCC TGAAATATCT ATGTTAATGA
  GCAGAGGCTG ACAGTAAAAT GTGTGAGGGG GGCTTCGTGG TACCCCAAAT CAAGAAGTGA
  R
  TGGTCTCTTT GTCTCACCCC ATAATTCCTT CAACCCCACC TCGCTACCTA CCGGAAGTAC
  GGCCTGAGAG GTAGACACGT CCCTCTCGGA CTTGGCGGGG GTGGCACAGT ATGTCTCCAG
  GAGGGCCAGG TCGCAGCTGC GGAAGCAGCA CTCTTCCACG ATGCCACGGC TGCGACGGTT
  GGCACGGCTT GAAGGCCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12741280	U71085_JC2163_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8246114					SNP	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142207985 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	37 bp proximal
D7Mit46	DNA segment, Chr 7, Massachusetts Institute of Technology 46	1153 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	676 bp downstream
Rr167001	regulatory region 167001	within coordinates
Tssr2462	transcription start site region 2462	1191 bp downstream
Tssr2463	transcription start site region 2463	395 bp upstream
Tssr70229	transcription start site region 70229	1231 bp downstream
Tssr70230	transcription start site region 70230	1138 bp downstream
Tssr70231	transcription start site region 70231	683 bp downstream
Tssr70232	transcription start site region 70232	630 bp downstream
Tssr70233	transcription start site region 70233	587 bp downstream
Tssr70234	transcription start site region 70234	549 bp downstream
Tssr70235	transcription start site region 70235	526 bp downstream
Tssr70236	transcription start site region 70236	504 bp downstream
Tssr70237	transcription start site region 70237	403 bp downstream
Tssr70238	transcription start site region 70238	373 bp downstream
Tssr70239	transcription start site region 70239	243 bp downstream
Tssr70240	transcription start site region 70240	65 bp upstream
Tssr75856	transcription start site region 75856	1983 bp upstream
Tssr75857	transcription start site region 75857	1968 bp upstream
Tssr75858	transcription start site region 75858	1930 bp upstream
Tssr75859	transcription start site region 75859	1874 bp upstream
Tssr75860	transcription start site region 75860	1819 bp upstream
Tssr75861	transcription start site region 75861	1787 bp upstream
Tssr75862	transcription start site region 75862	1240 bp upstream
Tssr75863	transcription start site region 75863	1209 bp upstream
Tssr75864	transcription start site region 75864	1180 bp upstream
Tssr75865	transcription start site region 75865	1147 bp upstream
Tssr75866	transcription start site region 75866	1100 bp upstream
Tssr75867	transcription start site region 75867	1067 bp upstream
Tssr75868	transcription start site region 75868	1048 bp upstream
Tssr75869	transcription start site region 75869	1026 bp upstream
Tssr75870	transcription start site region 75870	1013 bp upstream
Tssr75871	transcription start site region 75871	969 bp upstream
Tssr75872	transcription start site region 75872	561 bp upstream
Tssr75873	transcription start site region 75873	549 bp upstream
Tssr75874	transcription start site region 75874	339 bp upstream
Tssr75875	transcription start site region 75875	302 bp upstream
Tssr75876	transcription start site region 75876	254 bp upstream
Tssr75877	transcription start site region 75877	195 bp upstream
Tssr75878	transcription start site region 75878	70 bp downstream
Tssr75879	transcription start site region 75879	92 bp downstream
Tssr75880	transcription start site region 75880	142 bp downstream
Tssr75881	transcription start site region 75881	1436 bp downstream
Tssr75882	transcription start site region 75882	1477 bp downstream
Tssr75883	transcription start site region 75883	1788 bp downstream
Tssr75884	transcription start site region 75884	1826 bp downstream
Tssr75885	transcription start site region 75885	1873 bp downstream
Tssr75886	transcription start site region 75886	1931 bp downstream