rs8246118 SNP Detail

Summary

• ID
  rs8246118
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142207227 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TAAAA ACAAATTGGC TTTTAAGAAA
  Y
  TCCATAACTG ATAATCTAAA AATTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741284	U71085_JC2165_2	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246118					SNP	T	T	T	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142207227 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	795 bp proximal
D7Mit46	DNA segment, Chr 7, Massachusetts Institute of Technology 46	395 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	1434 bp downstream
Rr167001	regulatory region 167001	173 bp proximal
Tssr2462	transcription start site region 2462	433 bp downstream
Tssr2463	transcription start site region 2463	354 bp downstream
Tssr70229	transcription start site region 70229	473 bp downstream
Tssr70230	transcription start site region 70230	380 bp downstream
Tssr70231	transcription start site region 70231	63 bp upstream
Tssr70232	transcription start site region 70232	99 bp upstream
Tssr70233	transcription start site region 70233	149 bp upstream
Tssr70234	transcription start site region 70234	175 bp upstream
Tssr70235	transcription start site region 70235	211 bp upstream
Tssr70236	transcription start site region 70236	243 bp upstream
Tssr70237	transcription start site region 70237	339 bp upstream
Tssr70238	transcription start site region 70238	358 bp upstream
Tssr70239	transcription start site region 70239	502 bp upstream
Tssr70240	transcription start site region 70240	823 bp upstream
Tssr75852	transcription start site region 75852	1896 bp upstream
Tssr75853	transcription start site region 75853	1855 bp upstream
Tssr75854	transcription start site region 75854	1448 bp upstream
Tssr75855	transcription start site region 75855	1264 bp upstream
Tssr75856	transcription start site region 75856	1225 bp upstream
Tssr75857	transcription start site region 75857	1210 bp upstream
Tssr75858	transcription start site region 75858	1172 bp upstream
Tssr75859	transcription start site region 75859	1116 bp upstream
Tssr75860	transcription start site region 75860	1061 bp upstream
Tssr75861	transcription start site region 75861	1029 bp upstream
Tssr75862	transcription start site region 75862	482 bp upstream
Tssr75863	transcription start site region 75863	451 bp upstream
Tssr75864	transcription start site region 75864	422 bp upstream
Tssr75865	transcription start site region 75865	389 bp upstream
Tssr75866	transcription start site region 75866	342 bp upstream
Tssr75867	transcription start site region 75867	309 bp upstream
Tssr75868	transcription start site region 75868	290 bp upstream
Tssr75869	transcription start site region 75869	268 bp upstream
Tssr75870	transcription start site region 75870	255 bp upstream
Tssr75871	transcription start site region 75871	211 bp upstream
Tssr75872	transcription start site region 75872	176 bp downstream
Tssr75873	transcription start site region 75873	198 bp downstream
Tssr75874	transcription start site region 75874	407 bp downstream
Tssr75875	transcription start site region 75875	444 bp downstream
Tssr75876	transcription start site region 75876	476 bp downstream
Tssr75877	transcription start site region 75877	552 bp downstream
Tssr75878	transcription start site region 75878	828 bp downstream
Tssr75879	transcription start site region 75879	850 bp downstream
Tssr75880	transcription start site region 75880	900 bp downstream