rs8246174 SNP Detail

Summary

• ID
  rs8246174
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142209939 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGTAG TGATGTGCCC TTGGGCTGGC
  Y
  CCACCCCCAT GATGTCATAG CATGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741340	U71085_JC2186_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246174					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142209939 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	1752 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	1206 bp upstream
Tssr70240	transcription start site region 70240	1849 bp downstream
Tssr75878	transcription start site region 75878	1867 bp upstream
Tssr75879	transcription start site region 75879	1826 bp upstream
Tssr75880	transcription start site region 75880	1795 bp upstream
Tssr75881	transcription start site region 75881	490 bp upstream
Tssr75882	transcription start site region 75882	380 bp upstream
Tssr75883	transcription start site region 75883	144 bp upstream
Tssr75884	transcription start site region 75884	104 bp upstream
Tssr75885	transcription start site region 75885	35 bp upstream
Tssr75886	transcription start site region 75886	12 bp upstream
Tssr75887	transcription start site region 75887	1270 bp downstream