rs8246177 SNP Detail

Summary

• ID
  rs8246177
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142205824 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                    TAA AGAATGCATT GAGCCATCAA CCCCAGCTAG AGCCATCAAC
  M
  CCGGCTACCA CAATGTCCTG CTCTCCACAA CCTTGATTTT TTTTTTTATC TCTCTCTATC
  GCTTGGCCTG AGTTGGGAGT GGAGTCTCTG GGGGGTGCTG GCCACGCACC CACAGAGAAA
  TAAAAGGAAT TGAGAAGGNC GCTACCTGGC CTGACTTCTG GGGACAGTGG CTGGTCCCCA
  AAAGTTCTGA GGAGTGGAGG GGGCGTG                                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	NZB/BlNJ
ss12741343	U71085_JC2190_1	ROCHEBIO	RPAMM	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	NZB/BlNJ
rs8246177					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142205824 () rs orientation: reverse

Symbol	Name	Function Class
D7Mit46	DNA segment, Chr 7, Massachusetts Institute of Technology 46	826 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Rr167001	regulatory region 167001	1576 bp proximal
Tssr2462	transcription start site region 2462	959 bp upstream
Tssr2463	transcription start site region 2463	1757 bp downstream
Tssr70229	transcription start site region 70229	857 bp upstream
Tssr70230	transcription start site region 70230	989 bp upstream
Tssr70231	transcription start site region 70231	1466 bp upstream
Tssr70232	transcription start site region 70232	1502 bp upstream
Tssr70233	transcription start site region 70233	1552 bp upstream
Tssr70234	transcription start site region 70234	1578 bp upstream
Tssr70235	transcription start site region 70235	1614 bp upstream
Tssr70236	transcription start site region 70236	1646 bp upstream
Tssr70237	transcription start site region 70237	1742 bp upstream
Tssr70238	transcription start site region 70238	1761 bp upstream
Tssr70239	transcription start site region 70239	1905 bp upstream
Tssr75846	transcription start site region 75846	1275 bp upstream
Tssr75847	transcription start site region 75847	996 bp upstream
Tssr75848	transcription start site region 75848	962 bp upstream
Tssr75849	transcription start site region 75849	742 bp upstream
Tssr75850	transcription start site region 75850	696 bp upstream
Tssr75851	transcription start site region 75851	683 bp upstream
Tssr75852	transcription start site region 75852	493 bp upstream
Tssr75853	transcription start site region 75853	452 bp upstream
Tssr75854	transcription start site region 75854	45 bp upstream
Tssr75855	transcription start site region 75855	106 bp downstream
Tssr75856	transcription start site region 75856	166 bp downstream
Tssr75857	transcription start site region 75857	180 bp downstream
Tssr75858	transcription start site region 75858	209 bp downstream
Tssr75859	transcription start site region 75859	272 bp downstream
Tssr75860	transcription start site region 75860	329 bp downstream
Tssr75861	transcription start site region 75861	356 bp downstream
Tssr75862	transcription start site region 75862	905 bp downstream
Tssr75863	transcription start site region 75863	924 bp downstream
Tssr75864	transcription start site region 75864	962 bp downstream
Tssr75865	transcription start site region 75865	985 bp downstream
Tssr75866	transcription start site region 75866	1040 bp downstream
Tssr75867	transcription start site region 75867	1083 bp downstream
Tssr75868	transcription start site region 75868	1106 bp downstream
Tssr75869	transcription start site region 75869	1116 bp downstream
Tssr75870	transcription start site region 75870	1137 bp downstream
Tssr75871	transcription start site region 75871	1178 bp downstream
Tssr75872	transcription start site region 75872	1579 bp downstream
Tssr75873	transcription start site region 75873	1601 bp downstream
Tssr75874	transcription start site region 75874	1810 bp downstream
Tssr75875	transcription start site region 75875	1847 bp downstream
Tssr75876	transcription start site region 75876	1879 bp downstream
Tssr75877	transcription start site region 75877	1955 bp downstream