rs8246192 SNP Detail

Summary

• ID
  rs8246192
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142220365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGATTGCA CCAAACTGAT
  CAACACAACC CACACCAAAA GTAAGTAAGG GTTGCTGTGG GGGCACTGGA GAGGGGTCAG
  CAGGGAAGGC CAGTGTCCTG GGTCTGGATA GACTGAAGCC ATACCACTAT GTAATTGTTT
  TAGTGTCTGA ACCAACATTT GAAAGAAGAT TCTTGGCTTC TTTCTGGCAT GAGCATGATA
  K
  CCTGGAAGAG GGGTGGAATT CACCTGCTGG GAAGCCTGTG CCATTTGAGG CTTAGGCACA
  AGGACACAGA CCTACATGCT GCCCCCCAGT CTCCAGTATT CCACCAGACA CAGCCTCTAC
  CTCCCTGGTC CCTACCCAGT ACCTGACCAG TGAACTGCAG GGCCACCAAA CAGCAGAGCT
  TCCTCGGCAG AGTCCACAGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741358	U71085_JC2197_1	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246192					SNP	T	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142220365 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19969	CpG island 19969	1849 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Igf2os	insulin-like growth factor 2, opposite strand	within coordinates
Rr15	regulatory region 15	897 bp distal
Rr658256	regulatory region 658256	1448 bp distal
Tssr70256	transcription start site region 70256	1471 bp downstream
Tssr70257	transcription start site region 70257	834 bp downstream
Tssr70258	transcription start site region 70258	808 bp downstream
Tssr75901	transcription start site region 75901	1938 bp upstream
Tssr75902	transcription start site region 75902	1915 bp upstream
Tssr75903	transcription start site region 75903	1797 bp upstream
Tssr75904	transcription start site region 75904	407 bp upstream
Tssr75905	transcription start site region 75905	191 bp downstream