rs8246193 SNP Detail

Summary

• ID
  rs8246193
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142220366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGATTGCAC CAAACTGATC
  AACACAACCC ACACCAAAAG TAAGTAAGGG TTGCTGTGGG GGCACTGGAG AGGGGTCAGC
  AGGGAAGGCC AGTGTCCTGG GTCTGGATAG ACTGAAGCCA TACCACTATG TAATTGTTTT
  AGTGTCTGAA CCAACATTTG AAAGAAGATT CTTGGCTTCT TTCTGGCATG AGCATGATAT
  S
  CTGGAAGAGG GGTGGAATTC ACCTGCTGGG AAGCCTGTGC CATTTGAGGC TTAGGCACAA
  GGACACAGAC CTACATGCTG CCCCCCAGTC TCCAGTATTC CACCAGACAC AGCCTCTACC
  TCCCTGGTCC CTACCCAGTA CCTGACCAGT GAACTGCAGG GCCACCAAAC AGCAGAGCTT
  CCTCGGCAGA GTCCACAGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741359	U71085_JC2197_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246193					SNP	C	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142220366 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19969	CpG island 19969	1850 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Igf2os	insulin-like growth factor 2, opposite strand	within coordinates
Rr15	regulatory region 15	898 bp distal
Rr658256	regulatory region 658256	1449 bp distal
Tssr70256	transcription start site region 70256	1472 bp downstream
Tssr70257	transcription start site region 70257	835 bp downstream
Tssr70258	transcription start site region 70258	809 bp downstream
Tssr75901	transcription start site region 75901	1939 bp upstream
Tssr75902	transcription start site region 75902	1916 bp upstream
Tssr75903	transcription start site region 75903	1798 bp upstream
Tssr75904	transcription start site region 75904	408 bp upstream
Tssr75905	transcription start site region 75905	190 bp downstream