rs8246197 SNP Detail

Summary

• ID
  rs8246197
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142220083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGC GGTCTTGGAC ACCACATAGG
  R
  ACTCCACACC AGGAAGACCC AAGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	LG/J	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12741363	U71085_JC2198_2	ROCHEBIO	RPAMM	f	SNP	A		G	G		G
ss322471562	CHEV_7_149852251	CHEVERUD	SCREENING_POP	f	SNP		A			G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	LG/J	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8246197					SNP	A	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142220083 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19969	CpG island 19969	1567 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Igf2os	insulin-like growth factor 2, opposite strand	within coordinates
Rr15	regulatory region 15	615 bp distal
Rr658256	regulatory region 658256	1166 bp distal
Tssr70256	transcription start site region 70256	1189 bp downstream
Tssr70257	transcription start site region 70257	552 bp downstream
Tssr70258	transcription start site region 70258	526 bp downstream
Tssr75901	transcription start site region 75901	1656 bp upstream
Tssr75902	transcription start site region 75902	1633 bp upstream
Tssr75903	transcription start site region 75903	1515 bp upstream
Tssr75904	transcription start site region 75904	125 bp upstream
Tssr75905	transcription start site region 75905	473 bp downstream