rs8246203 SNP Detail

Summary

• ID
  rs8246203
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142217186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGATTCAA CTTGTAAAAT
  TTGGAGTTAG GGCAATAGAC TACAGAATCT AGTGTTCCAC GTTAATAAAA CCAGAGGACG
  GGTGGCGGGG GAAGAGAGTC AGCAGGAACA TTACTGCAGA TATAAAATGA TAGGAACATG
  GGGAAAACAC CCCGCTACCT CATCCCCTGG AGACAGTGCC TAAATGCTGT CAAAATGTCC
  R
  CTCTCCCAAG TAAGGAAATT TTGTCAAAAG GACTAAGGAC CCAGGCTTAC TTTAAATTTT
  AGGGAACTGA GAATGGTGGT TTTATATCTA TATATAGGAG CTTGCATTTA AAATGGTTAG
  GAGCCAGAAG CAAACTTGGG GGCCCAAGCC AAAATATTCT AATTGTGAGG AGTCAGCAGA
  GGCAGAATTC CCACCCTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12741369	U71085_JC2199_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8246203					SNP	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142217186 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19969	CpG island 19969	398 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Igf2os	insulin-like growth factor 2, opposite strand	within coordinates
Rr316	regulatory region 316	795 bp proximal
Rr658255	regulatory region 658255	1800 bp distal
Rr658256	regulatory region 658256	within coordinates
Tssr70256	transcription start site region 70256	1680 bp upstream
Tssr75899	transcription start site region 75899	1592 bp upstream
Tssr75900	transcription start site region 75900	1569 bp upstream
Tssr75901	transcription start site region 75901	1214 bp downstream
Tssr75902	transcription start site region 75902	1245 bp downstream
Tssr75903	transcription start site region 75903	1336 bp downstream