rs8247348 SNP Detail

Summary

• ID
  rs8247348
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30212627 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCTGT AGTCCAGGCT GGCTTGGAAC
  W
  CATGGCCCTC CTGTCTCAGC CTCCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12742591	Prodh2_1_JC4009_1	ROCHEBIO	RPAMM	f	SNP	A		T		A	T	A	A	A			A	A	A		A
ss148681074	ENSMUSSNP242750	ENSEMBL	ENSEMBL_Sanger	r	SNP		T		A						A
ss322134939	CHEV_7_31298221	CHEVERUD	SCREENING_POP	r	SNP											T				A
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8247348					SNP	A	A	T	T	A	T	A	A	A	T	A	A	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30212627 () rs orientation: reverse

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	1920 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	within coordinates
Tssr65778	transcription start site region 65778	1943 bp upstream