rs8247349 SNP Detail

Summary

• ID
  rs8247349
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30212588 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCTCA GCCTCCCAAG TGCTAGGATA
  M
  CAGGAGTGTG CCACCACACA GGACT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	AKR/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12742592	Prodh2_1_JC4009_2	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	AKR/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8247349					SNP	A	A	A	A	A	A	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30212588 () rs orientation: reverse

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	1959 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	within coordinates
Tssr65778	transcription start site region 65778	1982 bp upstream