rs8247353 SNP Detail

Summary

• ID
  rs8247353
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30213119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGTCAGTG ACATGCCTGG
  TGCACAAACT TGAGGACCTG GATTTACTCT CCAGCACCCA CATAAAACTC CAAGCATGGG
  GATACAGGCT GAGACACAGA TACTGGTTGG CCAGCCTTGC CCAGTTGGTG AGCCACAGGT
  TTCCAGTGAG AGATGCTGTC TCAAACAGAT GTGGCACTCG GAAGCACAGG CAAGAGGATT
  M
  CAGGTTCTAG GCTAGCCTGG ACTACATAGT GAGACTCTAT CTCAAACAAC AGCAACAAAA
  CCCAAGAGCT GAGGACATAG ATCACTGGCA GAACACTTGC CTAGAGTCAT CCCGTGAGAA
  GCTGGGGCAC AGCTCGATGG TAGAGTATGT GCTTAACATG CACAAAAAGT CTCTCTCCAG
  CACTGCAAAT GATAATAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12742596	Prodh2_1_JC4010_1	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8247353					SNP	C	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30213119 () rs orientation: forward

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	1428 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	292 bp downstream
Tssr2186	transcription start site region 2186	1535 bp upstream
Tssr65778	transcription start site region 65778	1451 bp upstream