rs8247354 SNP Detail

Summary

• ID
  rs8247354
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30213181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAACTCCA AGCATGGGGA
  TACAGGCTGA GACACAGATA CTGGTTGGCC AGCCTTGCCC AGTTGGTGAG CCACAGGTTT
  CCAGTGAGAG ATGCTGTCTC AAACAGATGT GGCACTCGGA AGCACAGGCA AGAGGATTCC
  AGGTTCTAGG CTAGCCTGGA CTACATAGTG AGACTCTATC TCAAACAACA GCAACAAAAC
  Y
  CAAGAGCTGA GGACATAGAT CACTGGCAGA ACACTTGCCT AGAGTCATCC CGTGAGAAGC
  TGGGGCACAG CTCGATGGTA GAGTATGTGC TTAACATGCA CAAAAAGTCT CTCTCCAGCA
  CTGCAAATGA TAATAAAAGC CACAAAGATG GAAAGGAGTT CCATGGTGGT GGCACATGCC
  TTCATCACAG CACTTGGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12742597	Prodh2_1_JC4010_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8247354					SNP	C	C	C	C	C	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30213181 () rs orientation: forward

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	1366 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	354 bp downstream
Tssr2186	transcription start site region 2186	1473 bp upstream
Tssr65778	transcription start site region 65778	1389 bp upstream