rs8247361 SNP Detail

Summary

• ID
  rs8247361
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30213852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATTCATA TATTAAATAA
  ATTAAAAAAA AAAAAACCAC CACCAAACAA CCTAAAAAAA TCCCATAGAG AAATGGTTCA
  GATTAAGGAG TGAGGAGCTA CGGATAAAGG GAAGTACAGG GCCTTTAGAC TTGCTCTGTG
  CTCCAGAGGC AACAAGGAAT CATGGGAGTT ACAGGCAGAG GGGACATGGC AACAGGTTCT
  Y
  TATCATGTGG ACGGTGAGCC AAATTAAAGG CAGCCATACC AGCATAGCTT GTTTCAGTTT
  CAAACAGTGG CAAATACTAT GAACAAGTTA GGGGAAACTT CTTGATGCAT ATTGTTAAGT
  AACAAGGCGA GACAACCATC TAAAACTGAA TGGAGCCAGC CTCGACAGTC CAGGTGATGT
  CTAAAGGGAG ACGTTCTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZW/Lac
ss12742604	Prodh2_1_JC4011_7	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZW/Lac
rs8247361					SNP	C	C	C	C	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30213852 () rs orientation: forward

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	695 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	1025 bp downstream
Tssr2186	transcription start site region 2186	802 bp upstream
Tssr65778	transcription start site region 65778	718 bp upstream