rs8247453 SNP Detail

Summary

• ID
  rs8247453
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30212872 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCGGT GCTTATTAAC TGAAGGAATG
  R
  CCCACCCCTT CTGAGCAGTC ATTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	LG/J	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12742705	Prodh2_1_JC4035_4	ROCHEBIO	RPAMM	f	SNP	A			A	A	A	A	G		G	A		G
ss148681106	ENSMUSSNP5188065	ENSEMBL	ENSEMBL_Sanger	r	SNP		T	C
ss322134945	CHEV_7_31298466	CHEVERUD	SCREENING_POP	r	SNP									T			C
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	LG/J	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8247453					SNP	A	A	G	A	A	A	A	G	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30212872 () rs orientation: reverse

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	1675 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	45 bp downstream
Tssr2186	transcription start site region 2186	1782 bp upstream
Tssr65778	transcription start site region 65778	1698 bp upstream