rs8247457 SNP Detail

Summary

• ID
  rs8247457
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30214058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCATCTAAAA
  CTGAATGGAG CCAGCCTNGA CAGTNCAGGT GATGTCTAAA GGGAGNCGTT CTGAAGGGCC
  Y
  TCNNNTATGG GGCTCAGGGA AGAGCCTGGA AGNAGTCATG GTGAACACGG GACGACAGTT
  AGAGATGCGG AANCGCGGTT AAGAGGGTCC AGGATGGCAT GGCNGggagt tgggagagat
  ggctgaacgn ttaggagcac gggctgccca cccaccccag tgtcttgatt cttagcaccc
  acagggtagn tcacacgccc ctttaactcc agttccTCTC TTTTGTCTAT CGTGGACTTT
  AGGAGCCCGT GTGCTGA                                               
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac
ss12742709	Prodh2_1_JC4036_4	ROCHEBIO	RPAMM	f	SNP	C	T	T	T	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac
rs8247457					SNP	C	T	T	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30214058 () rs orientation: forward

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	489 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	1231 bp downstream
Tssr2186	transcription start site region 2186	596 bp upstream
Tssr65778	transcription start site region 65778	512 bp upstream