rs8247463 SNP Detail

Summary

• ID
  rs8247463
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30214248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAAGGGCC TTCAGGTATG
  GGGCTCAGGG AAGAGCCTGG AAGTAGTCAT GGTGAACACG GGACGACAGT TAGAGATGCG
  GAACCGCGGT TAAGAGGGTC CAGGATGGCA TGGCTGGGAG TTGGGAGAGA TGGCTGAACG
  GTTAGGAGCA CGGGCTGCCC ACCCACCCCA GTGTCTTGAT TCTTAGCACC CACAGGGTAG
  W
  TCACACGCCC CTTTAACTCC AGTTCCTCTC TTTTGTCTAT CGTGGACTTT AGGAGCCCGT
  GTGCTGCGCT TACATACATA CAAGCAAAAT ATTCATACAC ATAATTAATA TAAATAATAA
  ATAAAAACTA AGAGATTCTG GCTGGCCTGA AGTTCTGGAG CACACAAGGA GGAAGGAGAG
  TCAACTGAAA CCCTTGGGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	MSM/Ms	NZB/BlNJ	NZW/Lac	SM/J
ss12742715	Prodh2_1_JC4036_10	ROCHEBIO	RPAMM	f	SNP	T		A	A	A	A	T			T		T	T
ss148681200	ENSMUSSNP4815387	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						A			T
ss322134956	CHEV_7_31299842	CHEVERUD	SCREENING_POP	f	SNP									T					A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	MSM/Ms	NZB/BlNJ	NZW/Lac	SM/J
rs8247463					SNP	T	A	A	A	A	A	T	A	T	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30214248 () rs orientation: forward

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	299 bp upstream
Prodh2	proline dehydrogenase (oxidase) 2	1421 bp downstream
Tssr2186	transcription start site region 2186	406 bp upstream
Tssr65778	transcription start site region 65778	322 bp upstream