rs8248288 SNP Detail

Summary

• ID
  rs8248288
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82272547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTGTCAG GCTGTGAGAC
  CTTGACTGAG AGCCTGGGAC ATGCTGACAG CAGTGTCTCC TTACAGCTGG GGCTGAGGGC
  TATGTGGCAT CGCTGACACC AGCAACAGGG ATTTAGGCAA GTGGTCCATG GTTACCTGAG
  TGTGACTTGG AGTGTGTGAA GGTCGGTCAG CCATGTGGAT GCTCTATCTC CTTGGCACCC
  R
  CCAAGCCATG GACAGTGAGG CTCACTGAGG ATCCCTGTGA GCAATGTCCT CAACTTGAGT
  CACACTGGTG ACTGGAAATC CCATCCTCTC ACACATCTGA CAGACAGGTG GGAGTGTGCC
  AAATTCCCTG AGCTCTGCTG TCACTTTGCC TGCTGCTCCT TGAATTCTCT GTCATTCCTG
  TGTGGTCAAC ACTGTGAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	SM/J	SPRET/EiJ
ss12743588	Cyp2d11_2_JC5322_9	ROCHEBIO	RPAMM	f	SNP	A		A		A	G	A	A	G	G	A		G	A		A
ss148231966	ENSMUSSNP5947640	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A							A
ss325034565	CHEV_15_82218776	CHEVERUD	SCREENING_POP	f	SNP												G			A
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	SM/J	SPRET/EiJ
rs8248288					SNP	A	A	A	A	A	G	A	A	G	G	A	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82272547 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d11	cytochrome P450, family 2, subfamily d, polypeptide 11	808 bp downstream