rs8248291 SNP Detail

Summary

• ID
  rs8248291
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82272623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTATGTG GCATCGCTGA
  CACCAGCAAC AGGGATTTAG GCAAGTGGTC CATGGTTACC TGAGTGTGAC TTGGAGTGTG
  TGAAGGTCGG TCAGCCATGT GGATGCTCTA TCTCCTTGGC ACCCGCCAAG CCATGGACAG
  TGAGGCTCAC TGAGGATCCC TGTGAGCAAT GTCCTCAACT TGAGTCACAC TGGTGACTGG
  R
  AATCCCATCC TCTCACACAT CTGACAGACA GGTGGGAGTG TGCCAAATTC CCTGAGCTCT
  GCTGTCACTT TGCCTGCTGC TCCTTGAATT CTCTGTCATT CCTGTGTGGT CAACACTGTG
  AGGACAGCAG CCTTCCTGTC CCTGGGAGAA TTTCCAGTCA CTCATGACAC CGCAAGGTGT
  TGAAGGCCAC AATGTCATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SM/J	SPRET/EiJ	WSB/EiJ
ss12743591	Cyp2d11_2_JC5322_12	ROCHEBIO	RPAMM	f	SNP	G			G		G	A	G	G			G	G			A		G	G			G
ss48077960	NES12071916	PERLEGEN	MM_PANEL2	f	SNP		G			G			G		G	G	A	G	A			G			G			A
ss148231971	ENSMUSSNP5939699	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G								G
ss325034566	CHEV_15_82218852	CHEVERUD	SCREENING_POP	f	SNP															A						G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SM/J	SPRET/EiJ	WSB/EiJ
rs8248291					SNP	G	G	G	G	G	G	A	G	G	G	G	?	G	A	A	A	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48077960	NES12071916	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82272623 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d11	cytochrome P450, family 2, subfamily d, polypeptide 11	732 bp downstream