rs8251209 SNP Detail

Summary

• ID
  rs8251209
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56499194 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTTGC TTGTCCCTAG CTACTTGGTC
  Y
  CTTCCTCTAA CTCAGTGCTT CACAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss12746781	M22526_MC1243_3	ROCHEBIO	RPAMM	f	SNP			T		T	T		T	T	C	C						T
ss39185699	mCV23581751	ABI	CRAMUS_MOUSE	r	SNP		A	A						A		G
ss52723314	NES15569342	PERLEGEN	MM_PANEL2	r	SNP	A		A	A	A		G	A		G	G	A	A		G	A		A	A		A
ss324645042	CHEV_14_56880574	CHEVERUD	SCREENING_POP	r	SNP														A						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs8251209					SNP	T	T	T	T	T	T	C	T	T	C	C	T	T	T	C	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723314	NES15569342	PERLEGEN	MM_PANEL	r	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56499194 () rs orientation: reverse

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	432 bp proximal
Tssr128924	transcription start site region 128924	435 bp downstream
Tssr128925	transcription start site region 128925	480 bp downstream
Tssr128926	transcription start site region 128926	496 bp downstream