rs8251228 SNP Detail

Summary

• ID
  rs8251228
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498061 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              AGCCCCACCC TGCCGGCCCT
  GCCTGTCCTT CACACCTCCT GGGCAGCATC CTCTCTGACT CCACGTCTCT TACGTCTGCT
  CTCTTCACAG TATAATAAAT GTCACTTTGG GGGCCCACAA CATCAAAGAA CAGGAGAAGA
  CCCAGCAAGT CATCCCTATG GTAAAATGCA TTCCCCACCC AGACTATAAT CCTAAGACAT
  W
  CTCCAATGAC ATCATGCTGC TAAAGGTGAG ACCTGTCCCT GTCTTGGTCC ACGGACTGCC
  CCTCTTGCTC TCATCCTCTC AATTTCCTCC CTTTCATCCT GGCCTTCATG GTGTTTCAGA
  CCAGCAGGCC ATGAGCTGGA CTCTTGCTTC TTCCCCAACA GCTGAAGAGT AAGGCCAAGA
  GGACTAGAGC TGTGAGGCCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	SM/J
ss12746800	M22526_MC1245_2	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	A	T		T	T
ss324645014	CHEV_14_56879441	CHEVERUD	SCREENING_POP	r	SNP								A			T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	SM/J
rs8251228					SNP	T	T	T	T	T	A	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498061 () rs orientation: reverse

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	1565 bp proximal
Tssr128924	transcription start site region 128924	1568 bp downstream
Tssr128925	transcription start site region 128925	1613 bp downstream
Tssr128926	transcription start site region 128926	1629 bp downstream