rs8251232 SNP Detail

Summary

• ID
  rs8251232
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56497946 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCTTT CATCCTGGCC TTCATGGTGT
  Y
  TCAGACCAGC AGGCCATGAG CTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss12746804	M22526_MC1245_6	ROCHEBIO	RPAMM	f	SNP	T			T		T	T		T	T	C	C					T		T
ss39235200	mCV23581761	ABI	CRAMUS_MOUSE	r	SNP			A	A						A		G
ss52723326	NES15569330	PERLEGEN	MM_PANEL2	r	SNP		A		A	A	A		G	A		G	G	A	A		G		A		A	A		A
ss139586017	ENSMUSSNP2547459	ENSEMBL	ENSEMBL_Sanger	r	SNP				A								G
ss324645010	CHEV_14_56879326	CHEVERUD	SCREENING_POP	r	SNP															A							G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs8251232					SNP	T	T	T	T	T	T	T	C	T	T	C	C	T	T	T	C	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723326	NES15569330	PERLEGEN	MM_PANEL	r	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56497946 () rs orientation: reverse

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	1680 bp proximal
Tssr128924	transcription start site region 128924	1683 bp downstream
Tssr128925	transcription start site region 128925	1728 bp downstream
Tssr128926	transcription start site region 128926	1744 bp downstream