rs8251238 SNP Detail

Summary

• ID
  rs8251238
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56497708 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              CCCCAACAGC TGAAGAGTAA
  GGCCAAGAGG ACTAGAGCTG TGAGGCCCCT CAACCTGCCC AGGCGCAATG TCAATGTGAA
  GCCAGGAGAT GTGTGCTATG TGGCTGGTTG GGGAAGGATG GCCCCAATGG GCAAATACTC
  AAACACGCTA CAAGAGGTTG AGCTGACAGT ACAGAAGGAT CGGGAGTGTG AGTCCTACTT
  W
  AAAAATCGTT ACAACAAAAC CAATCAGATA TGTGCGGGGG ACCCAAAGAC CAAACGTGCT
  TCCTTTCGGG TAAGTTGGGT TGCAGTCCCC TCTGGGCTAA GTGGGAGGGG AAAAGGAATC
  TGGGACCTAG AGACCCAAAT ATCAAGGGAC TCCTTTACCC ACTGGCTGTG ATCTTTCTCC
  CTGGGAACAG CAGGTACTAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZB/BlNJ	SM/J
ss12746810	M22526_MC1245_12	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	A	T		T
ss324645004	CHEV_14_56879088	CHEVERUD	SCREENING_POP	r	SNP									A		T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZB/BlNJ	SM/J
rs8251238					SNP	T	T	T	T	T	T	A	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56497708 () rs orientation: reverse

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	1918 bp proximal
Tssr128924	transcription start site region 128924	1921 bp downstream
Tssr128925	transcription start site region 128925	1966 bp downstream
Tssr128926	transcription start site region 128926	1982 bp downstream