rs8251308 SNP Detail

Summary

• ID
  rs8251308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55204449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAGTCCT TGGGCACATT
  CCTCCTCCCC AAAGGGCCGA TGGGCAGATA GAGGAGAGAC AGGAGCGTCT CACACCACCT
  CCCCTACCCA GGCCCTTACC TCAGTTATTT TTAATCTGAA GGGTGAGTTG AACAACTGGG
  TAAGGGTCAC CTTCTCTTCC AGGCTTAATA TCTGTCCCCT GCCTCCAACA CACAAGCTCC
  Y
  ATCCCAGGCT CTCCCTTCCC CCTTTCAACC CTGGCTATCT GCATAGCTTC AGGCTGAGGG
  GAGCCTCCTA CTCTCTCAGA CCTGAAGTTC CACAGTGCTG GCTCCCCAGA GACAAAGTCA
  TGATGTCTAG GGAGGGCATC CAATTTGCAG GTGCACGACT CAGTTTCCCT TTGATAGTAA
  GAGAATTCTA CGCTCCCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ
ss12746889	M62404_MC1265_3	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ
rs8251308					SNP	C	C	C	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55204449 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	1766 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	65 bp upstream
Rr407057	regulatory region 407057	within coordinates
Rr492378	regulatory region 492378	398 bp distal
Rr492379	regulatory region 492379	within coordinates
Rr492380	regulatory region 492380	1243 bp proximal
Tssr4419	transcription start site region 4419	690 bp upstream
Tssr4420	transcription start site region 4420	577 bp upstream
Tssr4421	transcription start site region 4421	571 bp upstream
Tssr4422	transcription start site region 4422	519 bp upstream
Tssr4423	transcription start site region 4423	493 bp upstream
Tssr4424	transcription start site region 4424	455 bp upstream
Tssr4425	transcription start site region 4425	342 bp upstream
Tssr125718	transcription start site region 125718	1680 bp upstream
Tssr125719	transcription start site region 125719	1759 bp upstream
Tssr125720	transcription start site region 125720	1789 bp upstream
Tssr125721	transcription start site region 125721	1809 bp upstream
Tssr128732	transcription start site region 128732	1696 bp upstream
Tssr128733	transcription start site region 128733	1661 bp upstream
Tssr128734	transcription start site region 128734	1633 bp upstream
Tssr128735	transcription start site region 128735	1590 bp upstream
Tssr128736	transcription start site region 128736	1558 bp upstream
Tssr128737	transcription start site region 128737	1531 bp upstream
Tssr128738	transcription start site region 128738	1519 bp upstream
Tssr128739	transcription start site region 128739	1168 bp upstream
Tssr128740	transcription start site region 128740	1098 bp upstream
Tssr128741	transcription start site region 128741	1025 bp upstream
Tssr128742	transcription start site region 128742	407 bp upstream
Tssr128743	transcription start site region 128743	384 bp upstream
Tssr128744	transcription start site region 128744	55 bp upstream
Tssr128745	transcription start site region 128745	226 bp downstream
Tssr128746	transcription start site region 128746	960 bp downstream
Tssr128747	transcription start site region 128747	989 bp downstream
Tssr128748	transcription start site region 128748	1008 bp downstream
Tssr128749	transcription start site region 128749	1071 bp downstream
Tssr128750	transcription start site region 128750	1090 bp downstream
Tssr128751	transcription start site region 128751	1107 bp downstream
Tssr128752	transcription start site region 128752	1160 bp downstream
Tssr128753	transcription start site region 128753	1349 bp downstream
Tssr128754	transcription start site region 128754	1428 bp downstream