rs8251309 SNP Detail

Summary

• ID
  rs8251309
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55204476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAAAGGGC CGATGGGCAG
  ATAGAGGAGA GACAGGAGCG TCTCACACCA CCTCCCCTAC CCAGGCCCTT ACCTCAGTTA
  TTTTTAATCT GAAGGGTGAG TTGAACAACT GGGTAAGGGT CACCTTCTCT TCCAGGCTTA
  ATATCTGTCC CCTGCCTCCA ACACACAAGC TCCCATCCCA GGCTCTCCCT TCCCCCTTTC
  M
  ACCCTGGCTA TCTGCATAGC TTCAGGCTGA GGGGAGCCTC CTACTCTCTC AGACCTGAAG
  TTCCACAGTG CTGGCTCCCC AGAGACAAAG TCATGATGTC TAGGGAGGGC ATCCAATTTG
  CAGGTGCACG ACTCAGTTTC CCTTTGATAG TAAGAGAATT CTACGCTCCC CTCCTCTCTC
  TCCTTACTCT GTGCAGATAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ
ss12746890	M62404_MC1265_4	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ
rs8251309					SNP	A	A	A	A	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55204476 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	1739 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	92 bp upstream
Rr407057	regulatory region 407057	within coordinates
Rr492378	regulatory region 492378	425 bp distal
Rr492379	regulatory region 492379	within coordinates
Rr492380	regulatory region 492380	1216 bp proximal
Tssr4419	transcription start site region 4419	717 bp upstream
Tssr4420	transcription start site region 4420	604 bp upstream
Tssr4421	transcription start site region 4421	598 bp upstream
Tssr4422	transcription start site region 4422	546 bp upstream
Tssr4423	transcription start site region 4423	520 bp upstream
Tssr4424	transcription start site region 4424	482 bp upstream
Tssr4425	transcription start site region 4425	369 bp upstream
Tssr125718	transcription start site region 125718	1653 bp upstream
Tssr125719	transcription start site region 125719	1732 bp upstream
Tssr125720	transcription start site region 125720	1762 bp upstream
Tssr125721	transcription start site region 125721	1782 bp upstream
Tssr128732	transcription start site region 128732	1723 bp upstream
Tssr128733	transcription start site region 128733	1688 bp upstream
Tssr128734	transcription start site region 128734	1660 bp upstream
Tssr128735	transcription start site region 128735	1617 bp upstream
Tssr128736	transcription start site region 128736	1585 bp upstream
Tssr128737	transcription start site region 128737	1558 bp upstream
Tssr128738	transcription start site region 128738	1546 bp upstream
Tssr128739	transcription start site region 128739	1195 bp upstream
Tssr128740	transcription start site region 128740	1125 bp upstream
Tssr128741	transcription start site region 128741	1052 bp upstream
Tssr128742	transcription start site region 128742	434 bp upstream
Tssr128743	transcription start site region 128743	411 bp upstream
Tssr128744	transcription start site region 128744	82 bp upstream
Tssr128745	transcription start site region 128745	199 bp downstream
Tssr128746	transcription start site region 128746	933 bp downstream
Tssr128747	transcription start site region 128747	962 bp downstream
Tssr128748	transcription start site region 128748	981 bp downstream
Tssr128749	transcription start site region 128749	1044 bp downstream
Tssr128750	transcription start site region 128750	1063 bp downstream
Tssr128751	transcription start site region 128751	1080 bp downstream
Tssr128752	transcription start site region 128752	1133 bp downstream
Tssr128753	transcription start site region 128753	1322 bp downstream
Tssr128754	transcription start site region 128754	1401 bp downstream