rs8251629 SNP Detail

Summary

• ID
  rs8251629
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45217889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                              CACCN
  AAAAATTNTA TTTTANAACC NTATTATaca cacacacata cacacacaca cacacacaca
  cacacacaca cacacacaca cacacacaca cTCCTAGTAA TGAATAAATG CATGCTGAAA
  CTCAAATATA NAAAAGAATA AAAGAGGCAA AGNAANNGAC AAAATGTATG TTCATGCATA
  TGTGCNAGCA GAGAAATGTG TCTGTTTGAC CTAGAAAAGC AGAGGCAGAG TATAATAACA
  R
  GGCAATGATT GGTAACCAGG AAATTGTGAA GAATCCCTGT GAGCTAGAGA ATANNTAGAA
  ANNCGAGAGC GTGAAGA                                               
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	SPRET/EiJ
ss12747249	AF029215_AN1667_4	ROCHEBIO	RPAMM	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	SPRET/EiJ
rs8251629					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45217889 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	within coordinates
D16Mit84	DNA segment, Chr 16, Massachusetts Institute of Technology 84	172 bp proximal
Rr327058	regulatory region 327058	113 bp proximal
Rr327059	regulatory region 327059	1513 bp proximal
Tssr141233	transcription start site region 141233	381 bp upstream