rs8252708 SNP Detail

Summary

• ID
  rs8252708
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62314143 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              AGCCAACACA TACAATTAAT
  ACAATTAATA TTTTTATAGT TAAAACAGAG TTACTAAAGA AATTGTTTGA AAAGAAAATT
  ATGAAGACTG GAAAGACGGC TCAGTGCTTA AGAGCTTTGG CTAGTCTTCC AGAGAACCAG
  GGTTCAATTC CCAGCACTCA CAAAGGCAGC TTGTGAGCTG ATACTATCTG TATATTCAGT
  S
  CTAGGGAATC TGATGCTTTG TCCTGACCTC CAAAACAGGC ACAAATGTGG TGCACAGACA
  AATGTAGAGA TAAGACTCCC ATGCACAGAA CATAAATAAT GTAGTTTAAT TTTTTAAATT
  GTAAAACTGA AAATGGTTGC ACTTGCATTT TTATTTTCAG CACATCCCCA GATATCCGCC
  ATATAACAAG AAAATGATGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12748382	X15643_364B_3	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8252708					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62314143 () rs orientation: reverse

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	1113 bp upstream
Cpgi10125	CpG island 10125	452 bp distal
Gm9949	predicted gene 9949	within coordinates
Rr393783	regulatory region 393783	within coordinates
Rr539066	regulatory region 539066	867 bp distal
Rr539067	regulatory region 539067	247 bp distal
Tssr151487	transcription start site region 151487	890 bp downstream
Tssr151488	transcription start site region 151488	1854 bp upstream
Tssr153623	transcription start site region 153623	1086 bp upstream