rs8252710 SNP Detail

Summary

• ID
  rs8252710
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62313906 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GAATT AAGAATTACA CCTTCCCAAC
  Y
  CTACCCAAAT GTGTATACTT CTAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12748385	X15643_364B_6	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C			C	C	C		T
ss24739080	X15643_364B_8	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8252710					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62313906 () rs orientation: reverse

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	876 bp upstream
Cpgi10125	CpG island 10125	215 bp distal
Gm9949	predicted gene 9949	within coordinates
Rr393783	regulatory region 393783	within coordinates
Rr539064	regulatory region 539064	1923 bp distal
Rr539065	regulatory region 539065	1812 bp distal
Rr539066	regulatory region 539066	630 bp distal
Rr539067	regulatory region 539067	10 bp distal
Tssr151487	transcription start site region 151487	653 bp downstream
Tssr153623	transcription start site region 153623	849 bp upstream