rs8253072 SNP Detail

Summary

• ID
  rs8253072
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80015286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                               ACC TTATTTAAAT TTCTCCNCAA CANAACCCCT
  TGAATNTNAT ACGCAGGTTG TNTCAGTATT TTAAAGGCCT TAATTTCAAC AAAAATTAAC
  TCTATGCAAT AATTTTTAAG TTTTTCAGAC ATTTTAAAAG CANGCGCCTT AGTAAAAGGG
  CCATGGAAGC TCAAATCACC GTCCCAGCCT TACTAAGGCG CATGCTTTTA AAATGTCTGA
  R
  AAACTTAAAA ATTATTGCAN NGAGTTAATT TTTGTTGAAA TTAAGGCCTT TAAAATACTG
  ACACAACCTG CNTATCACAT TCAAGGGGTT CTGTTGTGGA GAAATTTAAA TAAGGTTTAC
  ATTGTAATTT TTTATAATTC AACTTGCAAC CACAAAATAG ATGGGGGAGA TAGGAGGAAA
  GGGCCAGGGC TCCAGCCACT CTTAAGAGAC ACTTGAAGGT AAAGCCTGCC ACTCAAAACT
  CCTTTTGTCT AAACATTCAT GCCTCAAATT TTATACTTCA GGAAACTAAT TTGGAGTGAA
  TGGGGG                                                           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12748808	Cyp1b1_2_AN2642_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8253072					SNP	A	A	A	A	A	A	A	A	G	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80015286 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	338 bp upstream
Tssr149449	transcription start site region 149449	198 bp upstream