rs8253074 SNP Detail

Summary

• ID
  rs8253074
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80015307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCATCAGA TGAAAATGAC
  CCCTACATTC ACAAAACATC CGGGTCTGGT TGGTTTAATA AGGAGTCCAG ACTGATACAT
  GAAGACTTTC ACTATTGTAA ATTTCTCATA GTAAAAGGGC CATGGAAGCT CAAATCACCG
  TCCCAGCCTT ACTAAGGCGC ATGCTTTTAA AATGTCTGAA AAACTTAAAA ATTATTGCAT
  W
  GAGTTAATTT TTGTTGAAAT TAAGGCCTTT AAAATACTGA CACAACCTGC GTATCACATT
  CAAGGGGTTC TGTTGTGGAG AAATTTAAAT AAGGTTTACA TTGTAATTTT TTATAATTCA
  ACTTGCAACC ACAAAATAGA TGGGGGAGAT AGGAGGAAAG GGCCAGGGCT CCAGCCACTC
  TTAAGAGACA CTTGAAGGTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12748810	Cyp1b1_2_AN2642_3	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8253074					SNP	A	A	A	A	A	A	A	A	A	A	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80015307 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	359 bp upstream
Tssr149449	transcription start site region 149449	219 bp upstream