rs8253075 SNP Detail

Summary

• ID
  rs8253075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80015358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTTAATAA GGAGTCCAGA
  CTGATACATG AAGACTTTCA CTATTGTAAA TTTCTCATAG TAAAAGGGCC ATGGAAGCTC
  AAATCACCGT CCCAGCCTTA CTAAGGCGCA TGCTTTTAAA ATGTCTGAAA AACTTAAAAA
  TTATTGCATA GAGTTAATTT TTGTTGAAAT TAAGGCCTTT AAAATACTGA CACAACCTGC
  R
  TATCACATTC AAGGGGTTCT GTTGTGGAGA AATTTAAATA AGGTTTACAT TGTAATTTTT
  TATAATTCAA CTTGCAACCA CAAAATAGAT GGGGGAGATA GGAGGAAAGG GCCAGGGCTC
  CAGCCACTCT TAAGAGACAC TTGAAGGTAA AGCCTGCCAC TCAAAACTCC TTTTGTCTAA
  ACATTCATGC CTCAAATTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SPRET/EiJ	WSB/EiJ
ss12748811	Cyp1b1_2_AN2642_4	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G
ss48381225	NES12267667	PERLEGEN	MM_PANEL2	f	SNP										A	G				A		A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SPRET/EiJ	WSB/EiJ
rs8253075					SNP	G	G	G	G	G	G	G	G	G	?	G	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48381225	NES12267667	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80015358 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	410 bp upstream
Tssr149449	transcription start site region 149449	270 bp upstream