rs8253085 SNP Detail

Summary

• ID
  rs8253085
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80015979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAATGGGA AACCCCCCAC
  GGGCCCTGTC CCCACTTTTC CACCCATCCA ACGCTTCTCA AAGGGCTTTC GGATTGTTTA
  CATAATCGGA ATACATGTAT TTCTAACCTC TCTCAGCTTC CAGGAAGTGG CTGCTCATCG
  TGGTGTGCCA TCCTAAATAA AAGAAACTGA TTTTAGGCAT CTCTGCTGTC TCAAGAAGCA
  R
  TTGTTAAACA ACCTCCCAAG ACAATCTTCA GATTCTGACT TTAAAAACAA AAACAAAAGA
  CACACAGACT TTAATACTCA ACTTAAAAAA CAACTACAAC AACAATAGTA AGAACTCGGA
  AAAAGAAACT ACCAATTACT GGTTGTAGTG AGCCTCCTAT CATATGGTCT CTAATGAACA
  CCCAGAACAT TCATGGCCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12748821	Cyp1b1_2_AN2644_3	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8253085					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80015979 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	1031 bp upstream
Tssr149449	transcription start site region 149449	891 bp upstream