rs8253130 SNP Detail

Summary

• ID
  rs8253130
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129127577 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                          ctc cccaagtggg ctaggctgag
  gagttggtna gcttcaatga tcccgttgcc tacacctctc caacactggc attccgagtt
  ttataccatt atacttgggc ttgtttGTTT GTTNNNNNNN NNNNNNNNNT Ttttntaatg
  K
  gggtactagt aaccaaactc aggncttcgt gcctgctgca aggcacaaac ttactaagcc
  atctccccag ACAGAGATTT TAATGTTATC TTACCTAGAC CATGGGAATT GCTCTTTGGA
  AAATGCTAAG CCTTTAATAA TCATTTAATC TTGAATATTC CTTCTCTTTA NNTAANAAAA
  TCTGTGCAGG GCAGAAACT                                             
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	SPRET/EiJ
ss12748873	U50280_AN693_4	ROCHEBIO	RPAMM	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	SPRET/EiJ
rs8253130					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129127577 () rs orientation: reverse

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	1208 bp upstream
Rr584992	regulatory region 584992	839 bp distal
Tssr1044	transcription start site region 1044	1618 bp upstream
Tssr1045	transcription start site region 1045	1392 bp upstream
Tssr35615	transcription start site region 35615	1202 bp upstream