rs8253135 SNP Detail

Summary

• ID
  rs8253135
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129126576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTTGGCT CAGCGCTATA
  TAAACAGCGT CTCCCCAGGC CTGCCCCTTC TGAACTGGAG CGAGTTAAAT ATAAAACAGG
  GCTTGAGCTT ATCGGCCAAT ACAGCAAAGG GGTGGGGGTT GGGAGAGGTG GAGATGTTGC
  CAAACCTCTG TCAGCTTCAG AGAAATCACT TGGCAAAGAG GTGTGCTTAC GATAGAAAAC
  R
  CAACCTTTGC CATCAGATCT AGGGCTTCTT CTTGCTGTGT GAGCAGCCGG GCTCTCTCAG
  CCAAAGGGCT TCTTAAATTT CACTATTTTA TTAGGTTGCT TGCCAAAGAA GCTAAGCGTG
  ATTTTTTTGT TGTTTTTTTT TTTTTTTTCT CCTCCTCTTT TCCTTCAAAT TATGTAAACA
  TTCCATTTCT GCCCTCTGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
ss12748878	U50280_AN694_2	ROCHEBIO	RPAMM	f	SNP	G		G		G	G	G		G	G	A	G				G				A
ss51623309	NES14655922	PERLEGEN	MM_PANEL2	f	SNP		G		G	G	G		G	G		A	G	G	G	G		G	G	A		G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
rs8253135					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623309	NES14655922	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129126576 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	207 bp upstream
Tssr1044	transcription start site region 1044	617 bp upstream
Tssr1045	transcription start site region 1045	391 bp upstream
Tssr35615	transcription start site region 35615	201 bp upstream