rs8253136 SNP Detail

Summary

• ID
  rs8253136
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129126608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCAGGCCT GCCCCTTCTG
  AACTGGAGCG AGTTAAATAT AAAACAGGGC TTGAGCTTAT CGGCCAATAC AGCAAAGGGG
  TGGGGGTTGG GAGAGGTGGA GATGTTGCCA AACCTCTGTC AGCTTCAGAG AAATCACTTG
  GCAAAGAGGT GTGCTTACGA TAGAAAACGC AACCTTTGCC ATCAGATCTA GGGCTTCTTC
  Y
  TGCTGTGTGA GCAGCCGGGC TCTCTCAGCC AAAGGGCTTC TTAAATTTCA CTATTTTATT
  AGGTTGCTTG CCAAAGAAGC TAAGCGTGAT TTTTTTGTTG TTTTTTTTTT TTTTTTCTCC
  TCCTCTTTTC CTTCAAATTA TGTAAACATT CCATTTCTGC CCTCTGCGGA AATCATATCT
  TAGAGTTCGA TACTTGGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
ss12748879	U50280_AN694_3	ROCHEBIO	RPAMM	f	SNP	T		T		T	T	T		T	T	C	T				T				C
ss51623306	NES14655924	PERLEGEN	MM_PANEL2	f	SNP		T		T	T	T		T	T		C	T	T	T	T		T	T	C		T
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
rs8253136					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623306	NES14655924	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129126608 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	239 bp upstream
Tssr1044	transcription start site region 1044	649 bp upstream
Tssr1045	transcription start site region 1045	423 bp upstream
Tssr35615	transcription start site region 35615	233 bp upstream