rs8253169 SNP Detail

Summary

• ID
  rs8253169
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129126959 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              GTTTGCAACT TGGCTACTCA
  TAAGAAGTTG TAATCCTCTA TGCATACCTT CACTCCCTAC CAATGACATC ATTGCTAATG
  GCTCTCTGGT AGGGCCAGCC ATTACAGCTG CTATCTGCTC CAAAGCTGAC ATACTATTCC
  TAAGTTTGCA GAGCATACTC TCGTTTTGGG ACAAACTCTC AGACTTTCCA AAGTTCCCCC
  Y
  CCCCCCCTCA CTCTCCTTCC CCTTTTTCGG CTTTCCTGAC CTGGCCAGTT GCTTCGCATT
  TCCCCTTCTG CCTTCCATCT ACCTGCCTTG GACTACCTGG TCCTGTAACT CTGTCACTGA
  CTGACTAAAT GATCCTTAAA CTTAGAAACT CCTCCAAGTA TCGAACTCTA AGATATGATT
  TCCGCAGAGG GCAGAAATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12748912	U50280_AN696_5	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8253169					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129126959 () rs orientation: reverse

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	590 bp upstream
Tssr1044	transcription start site region 1044	1000 bp upstream
Tssr1045	transcription start site region 1045	774 bp upstream
Tssr35615	transcription start site region 35615	584 bp upstream