rs8253179 SNP Detail

Summary

• ID
  rs8253179
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129126904 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GCTTT CCTGACCTGG CCAGTTGCTT
  Y
  GCATTTCCCC TTCTGCCTTC CATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
ss12748922	U50280_AN696_15	ROCHEBIO	RPAMM	f	SNP	C		C	C	C	C	C	C		C	C	T	C				C		C	C			C
ss51623300	NES14655927	PERLEGEN	MM_PANEL2	r	SNP		G		G	G		G		G	G		A	G	G	G	G		G			G	A		G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	PWD/PhJ	SPRET/EiJ	WSB/EiJ
rs8253179					SNP	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623300	NES14655927	PERLEGEN	MM_PANEL	r	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129126904 () rs orientation: reverse

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	535 bp upstream
Tssr1044	transcription start site region 1044	945 bp upstream
Tssr1045	transcription start site region 1045	719 bp upstream
Tssr35615	transcription start site region 35615	529 bp upstream