rs8255156 SNP Detail

Summary

• ID
  rs8255156
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:60937644 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTTTC CAGATTAGAG GCTAGGAAAT
  Y
  AAACAGACTT ACTGAAGACA AGGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZW/Lac
ss12751215	X13414_DA579_8	ROCHEBIO	RPAMM	f	SNP	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZW/Lac
rs8255156					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:60937644 () rs orientation: reverse

Symbol	Name	Function Class
Cd74	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	within coordinates
D18Mit77	DNA segment, Chr 18, Massachusetts Institute of Technology 77	331 bp distal
Rr405669	regulatory region 405669	724 bp downstream
Rr405670	regulatory region 405670	286 bp upstream
Rr405671	regulatory region 405671	1084 bp upstream
Rr405672	regulatory region 405672	1940 bp upstream
Rr538682	regulatory region 538682	714 bp distal
Tssr151326	transcription start site region 151326	716 bp downstream
Tssr151327	transcription start site region 151327	704 bp downstream
Tssr151328	transcription start site region 151328	434 bp upstream
Tssr151329	transcription start site region 151329	506 bp upstream
Tssr151330	transcription start site region 151330	1370 bp upstream
Tssr151331	transcription start site region 151331	1406 bp upstream
Tssr153492	transcription start site region 153492	558 bp upstream