rs8255240 SNP Detail

Summary

• ID
  rs8255240
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:4091066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

    TTCAAATG CCCAGGCAGG GCCTTCACGT AGTCATTCTT ACCATTCTCC TGCCAGGGAG
  ACACCCAAAG ATGTACCATC CTCCCACTGT CACAGTGCCC TGGGCACTGG ACTCCTGCTG
  CCCTGTAATG AATTCCAGAT ATANCNCCCC CCCCCAGGGA CATGGCCTAC CACTACCTAC
  TTCCTGGGCT ACCCTACCCC CCAGATTCAG GCTCACATAG TTTCTGTAGA TCATGGTGCC
  ATATTTGCCG CGAAGGTCCT CNACCCCATC ATTCACCATA TCCACCTGGG CGGCCTCCCT
  Y
  TGGTTTTTCC CATAAAGCCC TGCGGGTTGG GAGAGACAGC ATGACTGATC CCTGATTTCC
  TCAGG                                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	SPRET/EiJ
ss12751314	U15654_JC1576_4	ROCHEBIO	RPAMM	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	SPRET/EiJ
rs8255240					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:4091066 () rs orientation: forward

Symbol	Name	Function Class
Gstp2	glutathione S-transferase, pi 2	within coordinates
Rr357950	regulatory region 357950	1866 bp distal
Rr357953	regulatory region 357953	1935 bp proximal
Rr363269	regulatory region 363269	134 bp proximal
Tssr157438	transcription start site region 157438	1164 bp downstream
Tssr157439	transcription start site region 157439	1177 bp downstream