rs8255320 SNP Detail

Summary

• ID
  rs8255320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:140507607 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AAGAA AGCTGGTACT TGCTCCTCAG
  Y
  CGCCTCATCC TCGAGAGCAA GCGCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751408	AF087797_AN331_1	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255320					SNP	C	C	C	C	C	C	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:140507607 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi22975	CpG island 22975	within coordinates
Gm15295	predicted gene 15295	within coordinates
Irs4	insulin receptor substrate 4	within coordinates
Rr3101	regulatory region 3101	407 bp distal
Rr8325	regulatory region 8325	1806 bp distal
Rr8326	regulatory region 8326	within coordinates
Tssr164271	transcription start site region 164271	570 bp downstream